CUT&Tag Data Analysis
Novel epigenetics discoveries in minutes. Transform raw data into interactive plots, all in your browser.

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The intuitive data & analysis platform you've been looking for

 

Pluto is an end-to-end discovery platform built for life science teams. Get started analyzing your CUT&Tag data in minutes, with no need to set up bioinformatics pipelines or manage infrastructure.
 
Tip: Pluto supports 20+ assays besides CUT&TAG. You can upload FASTQ files or tabular results to begin visualizing results right away!

Industry-best visualizations, all in one place

Science moves fast - your team deserves software that can keep up. Instead of using 5+ disparate tools to analyze your CUT&Tag data, create all of the exploratory visualizations you need in one place.  Search, embed, and share your results, then customize final, publication-ready figures for export.

Tip: In Pluto, every analysis has its own, fully dynamic methods section, including all analysis parameters and relevant references.

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Built for scientific teams that scale: No per-sample or per-user costs

Single annual platform fee, so your team knows the entire cost upfront. No uncontrolled costs, or using fewer samples to minimize expense.

 

Customizable, publication-quality results and figures

Easily customize colors and visual appearance for beautiful plots, every time. Apply company-approved color palettes for consistency.

We manage the pipelines so you don't have to.

70% of teams time is spent managing the systems to support the analysis.  We do this for you, so you can spend 100% of your time making discoveries.

Flexible and data-driven to support different experimental designs 

  • Annotate samples with relevant metadata
  • Your annotations customize analyses
  • R&D, preclinical, or clinical sample types
  • Organize both in vivo and in vitro studies

Native analysis and visual capabilities for CUT&Tag data 

  • FASTQ file storage
  • Alignment and processing pipeline
  • Detailed QC metrics and reporting
  • Interactive, biology-focused analysis

Plus, support for 20+ more assays, all in one platform

  • Epigenetics
  • Transcriptomics
  • Low-throughput assays (e.g. qPCR, ELISA)
  • And more! 

Side by side analysis. 

Store multiple CUT&Tag experiments in Pluto for comparison and organization

Collaborate and share, securely

Invite internal or external collaborators with role based permissions. 

See it in action, schedule a demo today.   

Beyond CUT&Tag Pluto can manage RNA-seq, low throughput experiments, and much more. 

Side by side analysis. 

Store multiple CUT&Tag experiments in Pluto for comparison and organization

Collaborate and share, securely

Invite internal or external collaborators with role based permissions. 

See it in action, schedule a demo today.   

Beyond CUT&Tag Pluto can manage RNA-seq, low throughput experiments, and much more. 

Analysis and plot types

Differential binding analysis

Peak analysis with integrative
genome viewer (IGV) plots

Pathway analysis

  • Identify targets that are differentially bound under different conditions
  • Calculate statistically significance using bioinformatics best-practices (no coding required)
  • Visualize signal-to-background
  • Look at peaks of interest in different samples
  • See top changed pathways and compute pathway-level statistics

Summarize raw and normalized counts with bar plots and box plots

Longitudinal analysis with line plots

Dimensionality reduction analysis

  • Visualize intra-sample variability 
  • See how binding changes over time or with increasing dose
  • See how your samples cluster over time or with increasing dose

Survival analysis

   
  • Correlate to clinical outcomes
Have other analysis and plot types, talk to our science advisors about how we can make Pluto work for you  

 

 

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